Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Gm10728-201ENSMUST00000194292 1829 ntBASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Gm9823-201ENSMUST00000051212 327 ntBASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Gm18630-201ENSMUST00000222109 1397 ntBASIC16■□□□□ 0.15
Ripk4Q9ERK0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Gm45684-201ENSMUST00000210244 1571 ntBASIC16■□□□□ 0.15
Ripk4Q9ERK0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Gm38266-201ENSMUST00000194931 421 ntBASIC16■□□□□ 0.15
Ripk4Q9ERK0 Gm17823-201ENSMUST00000217830 1006 ntBASIC16■□□□□ 0.15
Ripk4Q9ERK0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 AC133598.1-201ENSMUST00000224327 660 ntBASIC16■□□□□ 0.15
Ripk4Q9ERK0 AC140406.1-201ENSMUST00000226481 465 ntBASIC16■□□□□ 0.15
Ripk4Q9ERK0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Gm10146-201ENSMUST00000072739 309 ntBASIC16■□□□□ 0.15
Ripk4Q9ERK0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Ripk4Q9ERK0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16■□□□□ 0.15
Ripk4Q9ERK0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Gm3961-201ENSMUST00000204425 994 ntBASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Gm9257-201ENSMUST00000221254 232 ntBASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Snora73a-201ENSMUST00000082453 205 ntBASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Ripk4Q9ERK0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms