Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.43■□□□□ 0.06
Smc3Q9CW03 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.43■□□□□ 0.06
Smc3Q9CW03 Gm42550-201ENSMUST00000201553 960 ntBASIC15.43■□□□□ 0.06
Smc3Q9CW03 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.43■□□□□ 0.06
Smc3Q9CW03 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.43■□□□□ 0.06
Smc3Q9CW03 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.43■□□□□ 0.06
Smc3Q9CW03 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.42■□□□□ 0.06
Smc3Q9CW03 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.42■□□□□ 0.06
Smc3Q9CW03 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc3Q9CW03 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Gm15321-201ENSMUST00000121290 288 ntBASIC15.41■□□□□ 0.06
Smc3Q9CW03 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.41■□□□□ 0.06
Smc3Q9CW03 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc3Q9CW03 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.41■□□□□ 0.06
Smc3Q9CW03 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.41■□□□□ 0.06
Smc3Q9CW03 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc3Q9CW03 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms