Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Mir7221-201ENSMUST00000184009 72 ntBASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Gm27772-201ENSMUST00000184900 187 ntBASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ska1Q9CPV1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Gm15770-201ENSMUST00000117498 584 ntBASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.41□□□□□ -0.42
Ska1Q9CPV1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Gm45841-201ENSMUST00000207700 164 ntBASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Gm9063-201ENSMUST00000223299 582 ntBASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ska1Q9CPV1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms