Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Mir874-201ENSMUST00000104769 76 ntBASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Gm40466-201ENSMUST00000212174 422 ntBASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2ird2Q99NI3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm16177-201ENSMUST00000120728 718 ntBASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Gm45841-201ENSMUST00000207700 164 ntBASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Gtf2ird2Q99NI3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms