Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Gm9083-201ENSMUST00000120423 819 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 Gm22334-201ENSMUST00000158070 133 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.78□□□□□ -0.2
Clp1Q99LI9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clp1Q99LI9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clp1Q99LI9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clp1Q99LI9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clp1Q99LI9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clp1Q99LI9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.77□□□□□ -0.2
Clp1Q99LI9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Gm23363-201ENSMUST00000175024 79 ntBASIC13.77□□□□□ -0.21
Clp1Q99LI9 Gm25700-201ENSMUST00000177693 110 ntBASIC13.77□□□□□ -0.21
Clp1Q99LI9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Gm44262-201ENSMUST00000204969 372 ntBASIC13.77□□□□□ -0.21
Clp1Q99LI9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clp1Q99LI9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms