Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Gm26315-201ENSMUST00000083890 321 ntBASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha8Q91Y12 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm15429-201ENSMUST00000151268 798 ntBASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Mir7221-201ENSMUST00000184009 72 ntBASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm44397-201ENSMUST00000195950 113 ntBASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm18018-201ENSMUST00000198273 408 ntBASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.79□□□□□ -0.36
Pcdha8Q91Y12 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha8Q91Y12 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms