Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Gm43133-201ENSMUST00000197472 463 ntBASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.13□□□□□ -0.31
Zcchc9Q8R1J3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Gm11618-201ENSMUST00000117946 267 ntBASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Gm37497-201ENSMUST00000195830 798 ntBASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Gm42627-201ENSMUST00000197347 224 ntBASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Gm10146-201ENSMUST00000072739 309 ntBASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Gm24526-201ENSMUST00000082921 158 ntBASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.12□□□□□ -0.31
Zcchc9Q8R1J3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm13342-201ENSMUST00000121055 207 ntBASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm38241-201ENSMUST00000192641 898 ntBASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm44364-201ENSMUST00000198368 141 ntBASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm7783-201ENSMUST00000204795 781 ntBASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zcchc9Q8R1J3 Gm16372-201ENSMUST00000073088 450 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms