Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 AC125807.1-201ENST00000483097 614 ntBASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 AC067863.1-201ENST00000494933 530 ntBASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 DUX4L27-201ENST00000554796 1261 ntBASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 AC140878.1-201ENST00000565277 250 ntBASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC4Q8N9L1 KRT8P37-201ENST00000451609 1420 ntBASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 KRT8P12-202ENST00000472924 1397 ntBASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 RPL37AP1-201ENST00000412502 279 ntBASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 HIST3H2BA-201ENST00000436555 524 ntBASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 AL589739.1-201ENST00000607720 493 ntBASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC4Q8N9L1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 CETN4P-206ENST00000642099 2168 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AL080243.2-201ENST00000418783 582 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC092580.3-201ENST00000430932 139 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 HLA-V-204ENST00000476601 1289 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC097493.3-201ENST00000509725 367 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC069120.2-201ENST00000524091 540 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 RFPL4AP1-201ENST00000530883 850 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC106028.4-201ENST00000614509 607 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms