Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf31Q8CCF0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf31Q8CCF0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf31Q8CCF0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf31Q8CCF0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Gm22018-201ENSMUST00000104357 131 ntBASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Gm11637-201ENSMUST00000120601 592 ntBASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Gm19184-201ENSMUST00000196798 928 ntBASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Gm19309-201ENSMUST00000218295 205 ntBASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf31Q8CCF0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm25261-201ENSMUST00000157416 134 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm25927-201ENSMUST00000175058 117 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Mir7221-201ENSMUST00000184009 72 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm37008-201ENSMUST00000195712 319 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm6458-201ENSMUST00000211573 635 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm45880-201ENSMUST00000213041 853 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 Matn2-206ENSMUST00000228570 2798 ntBASIC14.34□□□□□ -0.11
Prpf31Q8CCF0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.33□□□□□ -0.11
Prpf31Q8CCF0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.33□□□□□ -0.11
Prpf31Q8CCF0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Prpf31Q8CCF0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf31Q8CCF0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf31Q8CCF0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf31Q8CCF0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf31Q8CCF0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.33□□□□□ -0.11
Prpf31Q8CCF0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Gm26185-201ENSMUST00000157692 266 ntBASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Gm18054-201ENSMUST00000207539 555 ntBASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf31Q8CCF0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms