Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 AC154849.4-201ENSMUST00000224868 365 ntBASIC17.3■□□□□ 0.36
Cps1Q8C196 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cps1Q8C196 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.3■□□□□ 0.36
Cps1Q8C196 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cps1Q8C196 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cps1Q8C196 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Gm12196-201ENSMUST00000120954 262 ntBASIC17.29■□□□□ 0.36
Cps1Q8C196 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.29■□□□□ 0.36
Cps1Q8C196 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cps1Q8C196 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cps1Q8C196 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
Cps1Q8C196 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cps1Q8C196 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cps1Q8C196 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cps1Q8C196 Gm15131-201ENSMUST00000119124 595 ntBASIC17.28■□□□□ 0.36
Cps1Q8C196 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Gm18038-201ENSMUST00000197900 485 ntBASIC17.28■□□□□ 0.36
Cps1Q8C196 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC17.28■□□□□ 0.36
Cps1Q8C196 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.28■□□□□ 0.36
Cps1Q8C196 AC166992.1-201ENSMUST00000216356 565 ntBASIC17.28■□□□□ 0.36
Cps1Q8C196 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC17.28■□□□□ 0.36
Cps1Q8C196 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cps1Q8C196 Gm5525-201ENSMUST00000190438 1312 ntBASIC17.28■□□□□ 0.36
Cps1Q8C196 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cps1Q8C196 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC17.28■□□□□ 0.36
Cps1Q8C196 AC123619.2-202ENSMUST00000225097 1568 ntBASIC17.28■□□□□ 0.36
Cps1Q8C196 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cps1Q8C196 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cps1Q8C196 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC17.27■□□□□ 0.36
Cps1Q8C196 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Gm12501-201ENSMUST00000119163 529 ntBASIC17.27■□□□□ 0.36
Cps1Q8C196 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cps1Q8C196 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Gm270-201ENSMUST00000223010 976 ntBASIC17.27■□□□□ 0.36
Cps1Q8C196 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC17.27■□□□□ 0.36
Cps1Q8C196 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cps1Q8C196 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC17.27■□□□□ 0.36
Cps1Q8C196 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cps1Q8C196 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cps1Q8C196 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cps1Q8C196 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cps1Q8C196 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Cps1Q8C196 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cps1Q8C196 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cps1Q8C196 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cps1Q8C196 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms