Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ppp4r4Q8C0Y0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.3□□□□□ -0.28
Ppp4r4Q8C0Y0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ppp4r4Q8C0Y0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ppp4r4Q8C0Y0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ppp4r4Q8C0Y0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ppp4r4Q8C0Y0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm5356-201ENSMUST00000093326 615 ntBASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ppp4r4Q8C0Y0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm12928-201ENSMUST00000117115 573 ntBASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ppp4r4Q8C0Y0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ppp4r4Q8C0Y0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ppp4r4Q8C0Y0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ppp4r4Q8C0Y0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ppp4r4Q8C0Y0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ppp4r4Q8C0Y0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms