Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.11□□□□□ -0.15
Nop53Q8BK35 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gm22189-201ENSMUST00000103822 86 ntBASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.11□□□□□ -0.15
Nop53Q8BK35 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gm45841-201ENSMUST00000207700 164 ntBASIC14.11□□□□□ -0.15
Nop53Q8BK35 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.11□□□□□ -0.15
Nop53Q8BK35 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nop53Q8BK35 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.11□□□□□ -0.15
Nop53Q8BK35 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.1□□□□□ -0.15
Nop53Q8BK35 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nop53Q8BK35 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Gm5745-201ENSMUST00000183748 313 ntBASIC14.09□□□□□ -0.15
Nop53Q8BK35 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms