Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim50Q810I2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim50Q810I2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.8□□□□□ -0.36
Trim50Q810I2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim50Q810I2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim50Q810I2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.79□□□□□ -0.36
Trim50Q810I2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Gm14350-201ENSMUST00000116642 640 ntBASIC12.79□□□□□ -0.36
Trim50Q810I2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim50Q810I2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.79□□□□□ -0.36
Trim50Q810I2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.79□□□□□ -0.36
Trim50Q810I2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trim50Q810I2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim50Q810I2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.78□□□□□ -0.36
Trim50Q810I2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Gm13612-201ENSMUST00000119276 390 ntBASIC12.78□□□□□ -0.36
Trim50Q810I2 Gm5745-201ENSMUST00000183748 313 ntBASIC12.78□□□□□ -0.36
Trim50Q810I2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Gm7287-201ENSMUST00000205267 602 ntBASIC12.78□□□□□ -0.36
Trim50Q810I2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim50Q810I2 Gm7653-201ENSMUST00000214567 508 ntBASIC12.78□□□□□ -0.36
Trim50Q810I2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.78□□□□□ -0.36
Trim50Q810I2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim50Q810I2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim50Q810I2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim50Q810I2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim50Q810I2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim50Q810I2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim50Q810I2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim50Q810I2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim50Q810I2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim50Q810I2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms