Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Mir483-201ENSMUST00000093631 73 ntBASIC12.67□□□□□ -0.38
Tnrc18Q80WC3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm8199-201ENSMUST00000121323 823 ntBASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm25545-201ENSMUST00000122673 323 ntBASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Mir7677-201ENSMUST00000184226 67 ntBASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm13600-201ENSMUST00000117949 744 ntBASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm3332-201ENSMUST00000189337 928 ntBASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm44158-201ENSMUST00000203881 505 ntBASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnrc18Q80WC3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm7541-201ENSMUST00000118361 535 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm44329-201ENSMUST00000197469 112 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm28324-201ENSMUST00000187913 264 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnrc18Q80WC3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms