Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Gm16379-201ENSMUST00000161469 348 ntBASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Gm8762-201ENSMUST00000193486 339 ntBASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Gm38158-201ENSMUST00000194617 339 ntBASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Prpf40bQ80W14 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm29741-201ENSMUST00000192667 421 ntBASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Gm10146-201ENSMUST00000072739 309 ntBASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf40bQ80W14 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Gm6023-201ENSMUST00000118217 606 ntBASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Gm37986-201ENSMUST00000193285 383 ntBASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Gm37922-201ENSMUST00000195596 455 ntBASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Gm18041-201ENSMUST00000218210 618 ntBASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms