Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Gm42693-201ENSMUST00000196779 631 ntBASIC12.71□□□□□ -0.37
Avl9Q80U56 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.71□□□□□ -0.37
Avl9Q80U56 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Avl9Q80U56 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Avl9Q80U56 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Avl9Q80U56 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Avl9Q80U56 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Avl9Q80U56 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Avl9Q80U56 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Avl9Q80U56 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Avl9Q80U56 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Avl9Q80U56 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Avl9Q80U56 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Avl9Q80U56 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Avl9Q80U56 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Avl9Q80U56 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.71□□□□□ -0.38
Avl9Q80U56 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Avl9Q80U56 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Avl9Q80U56 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.7□□□□□ -0.38
Avl9Q80U56 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.7□□□□□ -0.38
Avl9Q80U56 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.7□□□□□ -0.38
Avl9Q80U56 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.7□□□□□ -0.38
Avl9Q80U56 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Avl9Q80U56 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.7□□□□□ -0.38
Avl9Q80U56 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Avl9Q80U56 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Avl9Q80U56 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm26185-201ENSMUST00000157692 266 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm28693-202ENSMUST00000190758 331 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Gm6007-201ENSMUST00000208170 823 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.69□□□□□ -0.38
Avl9Q80U56 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Avl9Q80U56 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Avl9Q80U56 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.69□□□□□ -0.38
Avl9Q80U56 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Avl9Q80U56 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms