Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Gm6334-201ENSMUST00000207083 228 ntBASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Gm6082-201ENSMUST00000215204 454 ntBASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Gm8598-201ENSMUST00000221184 836 ntBASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.77□□□□□ -0.2
Prpf38bQ80SY5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prpf38bQ80SY5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prpf38bQ80SY5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.77□□□□□ -0.2
Prpf38bQ80SY5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prpf38bQ80SY5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prpf38bQ80SY5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prpf38bQ80SY5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Prpf38bQ80SY5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Gm26927-201ENSMUST00000182385 965 ntBASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Mir6979-201ENSMUST00000183927 56 ntBASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Pck2-205ENSMUST00000226352 2784 ntBASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf38bQ80SY5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf38bQ80SY5 Gm22334-201ENSMUST00000158070 133 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms