Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Gm14767-201ENSMUST00000121559 586 ntBASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scaf4Q6PFF0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm14822-201ENSMUST00000122247 291 ntBASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm6888-201ENSMUST00000221983 706 ntBASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scaf4Q6PFF0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scaf4Q6PFF0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms