Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 MRPL3P1-201ENST00000400109 1033 ntBASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 RPS15P9-201ENST00000494093 319 ntBASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 TERC-201ENST00000602385 541 ntBASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 AL121894.2-201ENST00000602977 491 ntBASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM53Q6P2H8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 FRMD8P1-201ENST00000440433 1524 ntBASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 AC041040.2-201ENST00000622926 2899 ntBASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 AC073621.1-201ENST00000392730 636 ntBASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 AC092910.1-201ENST00000482027 1129 ntBASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 AC118758.2-201ENST00000614242 2813 ntBASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 TUBB8P12-201ENST00000308911 1335 ntBASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 TUBB7P-202ENST00000428444 1305 ntBASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 TUBB8P7-204ENST00000567960 1332 ntBASIC14.92□□□□□ -0.02
TMEM53Q6P2H8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 REXO1L2P-201ENST00000425429 2069 ntBASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms