Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.52□□□□□ -0.41
CishQ62225 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CishQ62225 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CishQ62225 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.51□□□□□ -0.41
CishQ62225 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CishQ62225 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CishQ62225 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.51□□□□□ -0.41
CishQ62225 Gm8805-201ENSMUST00000117848 313 ntBASIC12.51□□□□□ -0.41
CishQ62225 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.51□□□□□ -0.41
CishQ62225 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.51□□□□□ -0.41
CishQ62225 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.51□□□□□ -0.41
CishQ62225 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CishQ62225 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.51□□□□□ -0.41
CishQ62225 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CishQ62225 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CishQ62225 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
CishQ62225 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.5□□□□□ -0.41
CishQ62225 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.5□□□□□ -0.41
CishQ62225 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.5□□□□□ -0.41
CishQ62225 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CishQ62225 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CishQ62225 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.5□□□□□ -0.41
CishQ62225 Gm2231-201ENSMUST00000125661 612 ntBASIC12.5□□□□□ -0.41
CishQ62225 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
CishQ62225 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CishQ62225 Gm43818-201ENSMUST00000200605 466 ntBASIC12.5□□□□□ -0.41
CishQ62225 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.5□□□□□ -0.41
CishQ62225 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Gm10146-201ENSMUST00000072739 309 ntBASIC12.5□□□□□ -0.41
CishQ62225 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.5□□□□□ -0.41
CishQ62225 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.5□□□□□ -0.41
CishQ62225 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CishQ62225 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.5□□□□□ -0.41
CishQ62225 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CishQ62225 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CishQ62225 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
CishQ62225 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CishQ62225 Rubie-203ENSMUST00000227803 2430 ntBASIC12.49□□□□□ -0.41
CishQ62225 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CishQ62225 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms