Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Hes3Q61657 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Hes3Q61657 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.33□□□□□ -0.6
Hes3Q61657 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Gm27838-201ENSMUST00000184829 128 ntBASIC11.33□□□□□ -0.6
Hes3Q61657 Gm28760-201ENSMUST00000185995 736 ntBASIC11.33□□□□□ -0.6
Hes3Q61657 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.33□□□□□ -0.6
Hes3Q61657 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.33□□□□□ -0.6
Hes3Q61657 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hes3Q61657 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.33□□□□□ -0.6
Hes3Q61657 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.33□□□□□ -0.6
Hes3Q61657 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hes3Q61657 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.32□□□□□ -0.6
Hes3Q61657 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Hes3Q61657 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hes3Q61657 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Hes3Q61657 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.32□□□□□ -0.6
Hes3Q61657 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Gm14719-201ENSMUST00000121891 340 ntBASIC11.32□□□□□ -0.6
Hes3Q61657 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hes3Q61657 Mir8102-201ENSMUST00000184148 139 ntBASIC11.32□□□□□ -0.6
Hes3Q61657 Gm5279-201ENSMUST00000199575 745 ntBASIC11.32□□□□□ -0.6
Hes3Q61657 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.32□□□□□ -0.6
Hes3Q61657 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.32□□□□□ -0.6
Hes3Q61657 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hes3Q61657 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Hes3Q61657 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.32□□□□□ -0.6
Hes3Q61657 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hes3Q61657 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hes3Q61657 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hes3Q61657 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hes3Q61657 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.31□□□□□ -0.6
Hes3Q61657 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm15321-201ENSMUST00000121290 288 ntBASIC11.31□□□□□ -0.6
Hes3Q61657 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm42612-201ENSMUST00000197986 623 ntBASIC11.31□□□□□ -0.6
Hes3Q61657 Gm43170-201ENSMUST00000199827 612 ntBASIC11.31□□□□□ -0.6
Hes3Q61657 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm20949-201ENSMUST00000206478 952 ntBASIC11.31□□□□□ -0.6
Hes3Q61657 Gm45841-201ENSMUST00000207700 164 ntBASIC11.31□□□□□ -0.6
Hes3Q61657 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm6218-201ENSMUST00000219812 628 ntBASIC11.31□□□□□ -0.6
Hes3Q61657 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hes3Q61657 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.31□□□□□ -0.6
Hes3Q61657 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hes3Q61657 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms