Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Olfr284-202ENSMUST00000206647 966 ntBASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rc3h1Q4VGL6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Gm42627-201ENSMUST00000197347 224 ntBASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rc3h1Q4VGL6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Gm13786-201ENSMUST00000122371 333 ntBASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Gm6334-201ENSMUST00000207083 228 ntBASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Gm18935-201ENSMUST00000212692 664 ntBASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Gm10608-202ENSMUST00000213924 676 ntBASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms