Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Gm15429-201ENSMUST00000151268 798 ntBASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.37□□□□□ -0.43
Brf2Q3UAW9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.37□□□□□ -0.43
Brf2Q3UAW9 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brf2Q3UAW9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brf2Q3UAW9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms