Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Fndc4Q3TR08 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Fndc4Q3TR08 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Gm12151-201ENSMUST00000121374 290 ntBASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Fndc4Q3TR08 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Gm27838-201ENSMUST00000184829 128 ntBASIC11.19□□□□□ -0.62
Fndc4Q3TR08 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Fndc4Q3TR08 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms