Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.38■□□□□ 0.21
Nkx2-3P97334 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm15547-201ENSMUST00000122152 333 ntBASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm15276-201ENSMUST00000145953 498 ntBASIC16.38■□□□□ 0.21
Nkx2-3P97334 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm25732-201ENSMUST00000175168 60 ntBASIC16.38■□□□□ 0.21
Nkx2-3P97334 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Mir6979-201ENSMUST00000183927 56 ntBASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.38■□□□□ 0.21
Nkx2-3P97334 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-3P97334 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.37■□□□□ 0.21
Nkx2-3P97334 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Gm4909-201ENSMUST00000118749 794 ntBASIC16.37■□□□□ 0.21
Nkx2-3P97334 Gm14109-201ENSMUST00000118814 309 ntBASIC16.37■□□□□ 0.21
Nkx2-3P97334 Gm13492-201ENSMUST00000119772 665 ntBASIC16.37■□□□□ 0.21
Nkx2-3P97334 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Gm18753-201ENSMUST00000201000 566 ntBASIC16.37■□□□□ 0.21
Nkx2-3P97334 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.37■□□□□ 0.21
Nkx2-3P97334 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-3P97334 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Gm23200-201ENSMUST00000104379 132 ntBASIC16.36■□□□□ 0.21
Nkx2-3P97334 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms