Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC17.59■□□□□ 0.41
Nphp4P59240 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.59■□□□□ 0.41
Nphp4P59240 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Gm11597-201ENSMUST00000121423 964 ntBASIC17.59■□□□□ 0.41
Nphp4P59240 Gm5863-201ENSMUST00000121760 1008 ntBASIC17.59■□□□□ 0.41
Nphp4P59240 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Nphp4P59240 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nphp4P59240 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Nphp4P59240 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Nphp4P59240 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Nphp4P59240 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.58■□□□□ 0.41
Nphp4P59240 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Nphp4P59240 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.58■□□□□ 0.41
Nphp4P59240 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC17.58■□□□□ 0.41
Nphp4P59240 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp4P59240 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Nphp4P59240 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Nphp4P59240 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.58■□□□□ 0.4
Nphp4P59240 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC17.58■□□□□ 0.4
Nphp4P59240 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp4P59240 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Gm13394-201ENSMUST00000121658 1000 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 Gm26461-201ENSMUST00000175064 290 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 Gm8494-201ENSMUST00000178171 1233 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Mir7070-201ENSMUST00000183657 86 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Mir433-201ENSMUST00000093564 124 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.57■□□□□ 0.4
Nphp4P59240 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nphp4P59240 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Nphp4P59240 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.57■□□□□ 0.4
Nphp4P59240 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.57■□□□□ 0.4
Nphp4P59240 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp4P59240 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Nphp4P59240 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nphp4P59240 Gm14999-201ENSMUST00000121039 624 ntBASIC17.56■□□□□ 0.4
Nphp4P59240 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Gm37466-201ENSMUST00000195692 652 ntBASIC17.56■□□□□ 0.4
Nphp4P59240 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.56■□□□□ 0.4
Nphp4P59240 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.56■□□□□ 0.4
Nphp4P59240 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms