Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sssca1P56873 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm11594-201ENSMUST00000122313 162 ntBASIC10.61□□□□□ -0.71
Sssca1P56873 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm25948-201ENSMUST00000175334 112 ntBASIC10.61□□□□□ -0.71
Sssca1P56873 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.61□□□□□ -0.71
Sssca1P56873 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.61□□□□□ -0.71
Sssca1P56873 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.61□□□□□ -0.71
Sssca1P56873 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sssca1P56873 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.61□□□□□ -0.71
Sssca1P56873 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.61□□□□□ -0.71
Sssca1P56873 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.61□□□□□ -0.71
Sssca1P56873 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sssca1P56873 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.61□□□□□ -0.71
Sssca1P56873 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sssca1P56873 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.6□□□□□ -0.71
Sssca1P56873 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sssca1P56873 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.6□□□□□ -0.71
Sssca1P56873 Gm14767-201ENSMUST00000121559 586 ntBASIC10.6□□□□□ -0.71
Sssca1P56873 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.6□□□□□ -0.71
Sssca1P56873 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Sssca1P56873 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Sssca1P56873 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sssca1P56873 Chchd1-203ENSMUST00000224633 557 ntBASIC10.6□□□□□ -0.71
Sssca1P56873 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Sssca1P56873 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.6□□□□□ -0.71
Sssca1P56873 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sssca1P56873 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.6□□□□□ -0.71
Sssca1P56873 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sssca1P56873 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sssca1P56873 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sssca1P56873 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sssca1P56873 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sssca1P56873 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sssca1P56873 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sssca1P56873 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sssca1P56873 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sssca1P56873 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sssca1P56873 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms