Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.42□□□□□ -0.42
Nkx2-6P43688 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Gm7783-201ENSMUST00000204795 781 ntBASIC12.42□□□□□ -0.42
Nkx2-6P43688 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.42□□□□□ -0.42
Nkx2-6P43688 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.42□□□□□ -0.42
Nkx2-6P43688 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx2-6P43688 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.42□□□□□ -0.42
Nkx2-6P43688 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx2-6P43688 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.41□□□□□ -0.42
Nkx2-6P43688 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Gm13342-201ENSMUST00000121055 207 ntBASIC12.41□□□□□ -0.42
Nkx2-6P43688 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Gm29396-201ENSMUST00000185659 716 ntBASIC12.41□□□□□ -0.42
Nkx2-6P43688 Gm4768-201ENSMUST00000206199 686 ntBASIC12.41□□□□□ -0.42
Nkx2-6P43688 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Gm18935-201ENSMUST00000212692 664 ntBASIC12.41□□□□□ -0.42
Nkx2-6P43688 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-6P43688 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.4□□□□□ -0.42
Nkx2-6P43688 Gm11591-201ENSMUST00000120063 702 ntBASIC12.4□□□□□ -0.42
Nkx2-6P43688 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.4□□□□□ -0.42
Nkx2-6P43688 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.4□□□□□ -0.42
Nkx2-6P43688 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Gm9368-201ENSMUST00000219348 831 ntBASIC12.4□□□□□ -0.42
Nkx2-6P43688 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.4□□□□□ -0.42
Nkx2-6P43688 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.4□□□□□ -0.42
Nkx2-6P43688 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-6P43688 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms