Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.12□□□□□ -0.63
Hist1h1dP43277 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.12□□□□□ -0.63
Hist1h1dP43277 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1dP43277 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.11□□□□□ -0.63
Hist1h1dP43277 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.11□□□□□ -0.63
Hist1h1dP43277 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.11□□□□□ -0.63
Hist1h1dP43277 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.11□□□□□ -0.63
Hist1h1dP43277 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.11□□□□□ -0.63
Hist1h1dP43277 Gm17837-201ENSMUST00000186435 985 ntBASIC11.11□□□□□ -0.63
Hist1h1dP43277 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1dP43277 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.1□□□□□ -0.63
Hist1h1dP43277 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.1□□□□□ -0.63
Hist1h1dP43277 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Gm7775-201ENSMUST00000218871 853 ntBASIC11.1□□□□□ -0.63
Hist1h1dP43277 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.1□□□□□ -0.63
Hist1h1dP43277 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.1□□□□□ -0.63
Hist1h1dP43277 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1dP43277 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms