Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cd9P40240 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd9P40240 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd9P40240 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd9P40240 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd9P40240 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd9P40240 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Cd9P40240 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd9P40240 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.93□□□□□ -0.34
Cd9P40240 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.93□□□□□ -0.34
Cd9P40240 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.93□□□□□ -0.34
Cd9P40240 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Gm14921-201ENSMUST00000118643 908 ntBASIC12.93□□□□□ -0.34
Cd9P40240 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Cd9P40240 Gm27892-201ENSMUST00000185017 106 ntBASIC12.93□□□□□ -0.34
Cd9P40240 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Cd9P40240 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cd9P40240 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd9P40240 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cd9P40240 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cd9P40240 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cd9P40240 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.92□□□□□ -0.34
Cd9P40240 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.92□□□□□ -0.34
Cd9P40240 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.92□□□□□ -0.34
Cd9P40240 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.92□□□□□ -0.34
Cd9P40240 Gm15806-201ENSMUST00000120696 955 ntBASIC12.92□□□□□ -0.34
Cd9P40240 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.92□□□□□ -0.34
Cd9P40240 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.92□□□□□ -0.34
Cd9P40240 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.92□□□□□ -0.34
Cd9P40240 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cd9P40240 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.92□□□□□ -0.34
Cd9P40240 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.92□□□□□ -0.34
Cd9P40240 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cd9P40240 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.92□□□□□ -0.34
Cd9P40240 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Cd9P40240 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd9P40240 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.92□□□□□ -0.34
Cd9P40240 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.91□□□□□ -0.34
Cd9P40240 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd9P40240 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd9P40240 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd9P40240 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.91□□□□□ -0.34
Cd9P40240 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd9P40240 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd9P40240 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd9P40240 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd9P40240 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cd9P40240 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms