Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Nedd8P29595 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nedd8P29595 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nedd8P29595 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nedd8P29595 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Gm6973-201ENSMUST00000117080 721 ntBASIC12.09□□□□□ -0.47
Nedd8P29595 Gm1401-201ENSMUST00000122048 772 ntBASIC12.09□□□□□ -0.47
Nedd8P29595 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.09□□□□□ -0.47
Nedd8P29595 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.09□□□□□ -0.47
Nedd8P29595 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.09□□□□□ -0.47
Nedd8P29595 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.09□□□□□ -0.47
Nedd8P29595 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.09□□□□□ -0.47
Nedd8P29595 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nedd8P29595 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.09□□□□□ -0.47
Nedd8P29595 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nedd8P29595 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nedd8P29595 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Nedd8P29595 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nedd8P29595 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Nedd8P29595 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.08□□□□□ -0.48
Nedd8P29595 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Gm6222-201ENSMUST00000120787 396 ntBASIC12.08□□□□□ -0.48
Nedd8P29595 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.08□□□□□ -0.48
Nedd8P29595 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.08□□□□□ -0.48
Nedd8P29595 Gm18669-201ENSMUST00000216049 778 ntBASIC12.08□□□□□ -0.48
Nedd8P29595 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nedd8P29595 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nedd8P29595 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.08□□□□□ -0.48
Nedd8P29595 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Nedd8P29595 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.07□□□□□ -0.48
Nedd8P29595 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms