Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.38□□□□□ -0.43
TP20293 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.38□□□□□ -0.43
TP20293 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.38□□□□□ -0.43
TP20293 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TP20293 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.38□□□□□ -0.43
TP20293 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
TP20293 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.38□□□□□ -0.43
TP20293 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TP20293 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.38□□□□□ -0.43
TP20293 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TP20293 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TP20293 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TP20293 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TP20293 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.37□□□□□ -0.43
TP20293 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.37□□□□□ -0.43
TP20293 Gm12091-201ENSMUST00000146791 830 ntBASIC12.37□□□□□ -0.43
TP20293 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.37□□□□□ -0.43
TP20293 Gm23984-201ENSMUST00000157139 203 ntBASIC12.37□□□□□ -0.43
TP20293 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.37□□□□□ -0.43
TP20293 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.37□□□□□ -0.43
TP20293 Gm44397-201ENSMUST00000195950 113 ntBASIC12.37□□□□□ -0.43
TP20293 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Gm6983-201ENSMUST00000214912 628 ntBASIC12.37□□□□□ -0.43
TP20293 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.37□□□□□ -0.43
TP20293 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TP20293 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TP20293 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TP20293 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.37□□□□□ -0.43
TP20293 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.37□□□□□ -0.43
TP20293 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TP20293 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TP20293 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
TP20293 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TP20293 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.36□□□□□ -0.43
TP20293 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.36□□□□□ -0.43
TP20293 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Gm15429-201ENSMUST00000151268 798 ntBASIC12.36□□□□□ -0.43
TP20293 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TP20293 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.36□□□□□ -0.43
TP20293 Gm7063-201ENSMUST00000186840 981 ntBASIC12.36□□□□□ -0.43
TP20293 Gm9908-201ENSMUST00000211534 448 ntBASIC12.36□□□□□ -0.43
TP20293 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.36□□□□□ -0.43
TP20293 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TP20293 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TP20293 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TP20293 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.36□□□□□ -0.43
TP20293 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms