Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm14701-201ENSMUST00000117156 348 ntBASIC12.12□□□□□ -0.47
Cops4O88544 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.12□□□□□ -0.47
Cops4O88544 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.12□□□□□ -0.47
Cops4O88544 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.12□□□□□ -0.47
Cops4O88544 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Gm27622-201ENSMUST00000183779 60 ntBASIC12.12□□□□□ -0.47
Cops4O88544 Gm27430-201ENSMUST00000184585 107 ntBASIC12.12□□□□□ -0.47
Cops4O88544 Gm44333-201ENSMUST00000197168 107 ntBASIC12.12□□□□□ -0.47
Cops4O88544 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.12□□□□□ -0.47
Cops4O88544 Gm45841-201ENSMUST00000207700 164 ntBASIC12.12□□□□□ -0.47
Cops4O88544 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cops4O88544 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cops4O88544 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cops4O88544 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Cops4O88544 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.11□□□□□ -0.47
Cops4O88544 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.11□□□□□ -0.47
Cops4O88544 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cops4O88544 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.11□□□□□ -0.47
Cops4O88544 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.11□□□□□ -0.47
Cops4O88544 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.11□□□□□ -0.47
Cops4O88544 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Gm46209-201ENSMUST00000217912 553 ntBASIC12.11□□□□□ -0.47
Cops4O88544 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.11□□□□□ -0.47
Cops4O88544 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.11□□□□□ -0.47
Cops4O88544 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Gm8396-201ENSMUST00000057361 823 ntBASIC12.11□□□□□ -0.47
Cops4O88544 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cops4O88544 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cops4O88544 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cops4O88544 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cops4O88544 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cops4O88544 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.1□□□□□ -0.47
Cops4O88544 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
Cops4O88544 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cops4O88544 Gm15770-201ENSMUST00000117498 584 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Gm15460-201ENSMUST00000118147 391 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Gm15693-201ENSMUST00000120470 637 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Gm25144-201ENSMUST00000179561 110 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Gm25352-201ENSMUST00000179815 110 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Gm8927-201ENSMUST00000181978 981 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Gm43575-201ENSMUST00000196420 516 ntBASIC12.1□□□□□ -0.47
Cops4O88544 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Gm9229-201ENSMUST00000222777 126 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Shd-206ENSMUST00000225145 998 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cops4O88544 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Gm3222-201ENSMUST00000071282 990 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cops4O88544 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.1□□□□□ -0.47
Cops4O88544 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms