Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.9□□□□□ -0.18
Itgb3O54890 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 Gm10478-201ENSMUST00000084451 396 ntBASIC13.9□□□□□ -0.18
Itgb3O54890 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Itgb3O54890 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Itgb3O54890 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Itgb3O54890 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Itgb3O54890 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.9□□□□□ -0.18
Itgb3O54890 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.9□□□□□ -0.18
Itgb3O54890 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Itgb3O54890 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Itgb3O54890 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Grk6-205ENSMUST00000224653 2976 ntBASIC13.89□□□□□ -0.19
Itgb3O54890 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.89□□□□□ -0.19
Itgb3O54890 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.89□□□□□ -0.19
Itgb3O54890 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Itgb3O54890 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Itgb3O54890 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.89□□□□□ -0.19
Itgb3O54890 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.89□□□□□ -0.19
Itgb3O54890 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Gm27572-201ENSMUST00000183702 255 ntBASIC13.89□□□□□ -0.19
Itgb3O54890 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Itgb3O54890 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.89□□□□□ -0.19
Itgb3O54890 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Itgb3O54890 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Itgb3O54890 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Itgb3O54890 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.88□□□□□ -0.19
Itgb3O54890 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Itgb3O54890 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.88□□□□□ -0.19
Itgb3O54890 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.88□□□□□ -0.19
Itgb3O54890 Gm12363-201ENSMUST00000122250 668 ntBASIC13.88□□□□□ -0.19
Itgb3O54890 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.88□□□□□ -0.19
Itgb3O54890 Gm25927-201ENSMUST00000175058 117 ntBASIC13.88□□□□□ -0.19
Itgb3O54890 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.88□□□□□ -0.19
Itgb3O54890 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Itgb3O54890 Gm19163-201ENSMUST00000223313 780 ntBASIC13.88□□□□□ -0.19
Itgb3O54890 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.88□□□□□ -0.19
Itgb3O54890 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.88□□□□□ -0.19
Itgb3O54890 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Itgb3O54890 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms