Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Mir7221-201ENSMUST00000184009 72 ntBASIC14.06□□□□□ -0.16
Cpsf2O35218 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Gm5279-201ENSMUST00000199575 745 ntBASIC14.06□□□□□ -0.16
Cpsf2O35218 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cpsf2O35218 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf2O35218 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.05□□□□□ -0.16
Cpsf2O35218 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.05□□□□□ -0.16
Cpsf2O35218 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cpsf2O35218 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Cpsf2O35218 Gm27838-201ENSMUST00000184829 128 ntBASIC14.05□□□□□ -0.16
Cpsf2O35218 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.05□□□□□ -0.16
Cpsf2O35218 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.05□□□□□ -0.16
Cpsf2O35218 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.05□□□□□ -0.16
Cpsf2O35218 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cpsf2O35218 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.05□□□□□ -0.16
Cpsf2O35218 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf2O35218 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Gm19078-201ENSMUST00000206311 727 ntBASIC14.04□□□□□ -0.16
Cpsf2O35218 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpsf2O35218 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.04□□□□□ -0.16
Cpsf2O35218 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.04□□□□□ -0.16
Cpsf2O35218 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf2O35218 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf2O35218 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cpsf2O35218 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.03□□□□□ -0.16
Cpsf2O35218 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf2O35218 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf2O35218 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf2O35218 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf2O35218 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf2O35218 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms