Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm8213-201ENSMUST00000118191 441 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm10156-201ENSMUST00000122364 462 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm45841-201ENSMUST00000207700 164 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm25857-201ENSMUST00000082788 129 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
Gm10553J3QPF1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Gm10553J3QPF1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.02□□□□□ -0.8
Gm10553J3QPF1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10553J3QPF1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10553J3QPF1 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.02□□□□□ -0.8
Gm10553J3QPF1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Gm10553J3QPF1 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm44069-201ENSMUST00000204898 506 ntBASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10553J3QPF1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms