Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Gm27838-201ENSMUST00000184829 128 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 Gm19931-201ENSMUST00000198920 368 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.76□□□□□ -0.69
Trav18A0A075B656 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav18A0A075B656 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.75□□□□□ -0.69
Trav18A0A075B656 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Gm28760-201ENSMUST00000185995 736 ntBASIC10.75□□□□□ -0.69
Trav18A0A075B656 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.75□□□□□ -0.69
Trav18A0A075B656 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.75□□□□□ -0.69
Trav18A0A075B656 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms