Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm28630-201ENSMUST00000187806 498 ntBASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm8410-201ENSMUST00000117225 605 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm10253-201ENSMUST00000194270 940 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm43474-201ENSMUST00000196415 774 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm18905-201ENSMUST00000205454 928 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm18206-201ENSMUST00000207027 926 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cx3cr1Q9Z0D9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms