Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm9522-201ENSMUST00000182394 926 ntBASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm27838-201ENSMUST00000184829 128 ntBASIC12.34□□□□□ -0.43
Trim39Q9ESN2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm20949-201ENSMUST00000206478 952 ntBASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm45925-201ENSMUST00000218882 744 ntBASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm20445-201ENSMUST00000061905 565 ntBASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim39Q9ESN2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim39Q9ESN2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trim39Q9ESN2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim39Q9ESN2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim39Q9ESN2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Gm6912-201ENSMUST00000117218 544 ntBASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim39Q9ESN2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms