Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gm43058-201ENSMUST00000197645 625 ntBASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm13492-201ENSMUST00000119772 665 ntBASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm12266-201ENSMUST00000120311 962 ntBASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm10312-201ENSMUST00000078515 489 ntBASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-4Q9EQM3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Gm13408-201ENSMUST00000119822 798 ntBASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Gm13935-201ENSMUST00000121859 798 ntBASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Gm7848-201ENSMUST00000210739 718 ntBASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-4Q9EQM3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms