Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhac1Q91Y10 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Pcdhac1Q91Y10 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Gm5866-201ENSMUST00000177881 973 ntBASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Gm44855-201ENSMUST00000205725 362 ntBASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhac1Q91Y10 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms