Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Gm29396-201ENSMUST00000185659 716 ntBASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Gm38241-201ENSMUST00000192641 898 ntBASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Gm43758-201ENSMUST00000199500 367 ntBASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Gm24526-201ENSMUST00000082921 158 ntBASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb18Q91Y02 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Gm38341-201ENSMUST00000195357 515 ntBASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb18Q91Y02 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms