Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 CT009764.1-201ENSMUST00000222260 483 ntBASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Gm10012-201ENSMUST00000078252 192 ntBASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Gm11814-201ENSMUST00000119515 929 ntBASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Gm27486-201ENSMUST00000184923 80 ntBASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn1Q8K0T0 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn1Q8K0T0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn1Q8K0T0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms