Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox30Q8CGW4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.36□□□□□ -0.11
Sox30Q8CGW4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox30Q8CGW4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox30Q8CGW4 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.36□□□□□ -0.11
Sox30Q8CGW4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox30Q8CGW4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.36□□□□□ -0.11
Sox30Q8CGW4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox30Q8CGW4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox30Q8CGW4 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.35□□□□□ -0.11
Sox30Q8CGW4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Gm5687-201ENSMUST00000118252 640 ntBASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Gm5354-201ENSMUST00000182417 973 ntBASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Gm43575-201ENSMUST00000196420 516 ntBASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox30Q8CGW4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Gm10576-201ENSMUST00000191927 825 ntBASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.34□□□□□ -0.11
Sox30Q8CGW4 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.34□□□□□ -0.11
Sox30Q8CGW4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox30Q8CGW4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.33□□□□□ -0.11
Sox30Q8CGW4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.33□□□□□ -0.11
Sox30Q8CGW4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Gm13689-201ENSMUST00000119360 685 ntBASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Gm15321-201ENSMUST00000121290 288 ntBASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Gm12291-201ENSMUST00000121627 311 ntBASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.33□□□□□ -0.12
Sox30Q8CGW4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms