Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.77■□□□□ 0.27
Ccdc60Q8C4J0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc60Q8C4J0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Gm12390-201ENSMUST00000117897 397 ntBASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Gm27331-201ENSMUST00000183705 60 ntBASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Gm37922-201ENSMUST00000195596 455 ntBASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc60Q8C4J0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Gm8805-201ENSMUST00000117848 313 ntBASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc60Q8C4J0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm4984-201ENSMUST00000115987 360 ntBASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm6458-201ENSMUST00000211573 635 ntBASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm29705-201ENSMUST00000212598 474 ntBASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc60Q8C4J0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms