Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.39□□□□□ -0.43
Ska3Q8C263 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.39□□□□□ -0.43
Ska3Q8C263 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.39□□□□□ -0.43
Ska3Q8C263 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.39□□□□□ -0.43
Ska3Q8C263 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.39□□□□□ -0.43
Ska3Q8C263 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 Gm16372-201ENSMUST00000073088 450 ntBASIC12.39□□□□□ -0.43
Ska3Q8C263 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.39□□□□□ -0.43
Ska3Q8C263 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.39□□□□□ -0.43
Ska3Q8C263 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ska3Q8C263 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska3Q8C263 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.39□□□□□ -0.43
Ska3Q8C263 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.38□□□□□ -0.43
Ska3Q8C263 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.38□□□□□ -0.43
Ska3Q8C263 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.38□□□□□ -0.43
Ska3Q8C263 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.38□□□□□ -0.43
Ska3Q8C263 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Ska3Q8C263 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Gm6447-201ENSMUST00000118905 835 ntBASIC12.38□□□□□ -0.43
Ska3Q8C263 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Ska3Q8C263 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ska3Q8C263 Mir7221-201ENSMUST00000184009 72 ntBASIC12.38□□□□□ -0.43
Ska3Q8C263 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ska3Q8C263 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.38□□□□□ -0.43
Ska3Q8C263 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ska3Q8C263 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska3Q8C263 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ska3Q8C263 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.37□□□□□ -0.43
Ska3Q8C263 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.37□□□□□ -0.43
Ska3Q8C263 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.37□□□□□ -0.43
Ska3Q8C263 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Ska3Q8C263 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.37□□□□□ -0.43
Ska3Q8C263 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ska3Q8C263 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms