Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne1Q8C166 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm11478-201ENSMUST00000117851 599 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm6152-201ENSMUST00000151704 340 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm9002-201ENSMUST00000178437 499 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm6244-201ENSMUST00000178732 841 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm38671-201ENSMUST00000200573 130 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm7287-201ENSMUST00000205267 602 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm18473-201ENSMUST00000220543 868 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.3□□□□□ -0.44
Cpne1Q8C166 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpne1Q8C166 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm6447-201ENSMUST00000118905 835 ntBASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm5745-201ENSMUST00000183748 313 ntBASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm27892-201ENSMUST00000185017 106 ntBASIC12.29□□□□□ -0.44
Cpne1Q8C166 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.29□□□□□ -0.44
Cpne1Q8C166 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm5356-201ENSMUST00000093326 615 ntBASIC12.29□□□□□ -0.44
Cpne1Q8C166 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.29□□□□□ -0.44
Cpne1Q8C166 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpne1Q8C166 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms