Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Gm12490-201ENSMUST00000120255 560 ntBASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp43Q8BUM9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Gm6244-201ENSMUST00000178732 841 ntBASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Proscos-202ENSMUST00000178990 666 ntBASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.3□□□□□ -0.28
Usp43Q8BUM9 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp43Q8BUM9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gm10156-201ENSMUST00000122364 462 ntBASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms