Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col16a1Q8BLX7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Gm10179-201ENSMUST00000086233 688 ntBASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col16a1Q8BLX7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Gm14644-201ENSMUST00000116671 647 ntBASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Gm6506-201ENSMUST00000119775 1136 ntBASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Gm28882-201ENSMUST00000185504 314 ntBASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Gm45219-201ENSMUST00000205602 465 ntBASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 AC154849.4-201ENSMUST00000224868 365 ntBASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col16a1Q8BLX7 Gm23949-201ENSMUST00000104027 127 ntBASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Gm42937-201ENSMUST00000197360 752 ntBASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 AY036118-201ENSMUST00000200021 923 ntBASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 AC140293.1-201ENSMUST00000225626 1247 ntBASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Col16a1Q8BLX7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Gm15131-201ENSMUST00000119124 595 ntBASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col16a1Q8BLX7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col16a1Q8BLX7 Gm19459-201ENSMUST00000176240 835 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms