Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Gm11779-201ENSMUST00000118541 368 ntBASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Gm15467-201ENSMUST00000120582 445 ntBASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Gm38225-201ENSMUST00000194001 393 ntBASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Gm14494-201ENSMUST00000118786 435 ntBASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Rprl2-201ENSMUST00000157150 290 ntBASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf220Q6PDX6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms